cwl_utils.file_formats

CWL file formats utilities.

For more information, please visit https://www.commonwl.org/user_guide/16-file-formats/

Functions

formatSubclassOf(fmt, cls, ontology, visited)	Determine if fmt is a subclass of cls.
check_format(actual_file, input_formats, ontology)	Confirm that the format present is valid for the allowed formats.

Module Contents

cwl_utils.file_formats.formatSubclassOf(fmt, cls, ontology, visited)

Determine if fmt is a subclass of cls.

Parameters:

• fmt (str)

• cls (str)

• ontology (rdflib.Graph | None)

• visited (set[str])

Return type:

bool

cwl_utils.file_formats.check_format(actual_file, input_formats, ontology)

Confirm that the format present is valid for the allowed formats.

Parameters:

• actual_file (cwl_utils.types.CWLFileType | list[cwl_utils.types.CWLFileType])

• input_formats (list[str] | str)

• ontology (rdflib.Graph | None)

Return type:

None